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16. Pipelining with WDL and Cromwell
Run viral workflow WDL script using miniwdl tool
Run consensus genome workflow WDL script using miniwdl tool
Example: Simple WDL and Parameter Input File
WDL Task and Workflow Files
WDL Workflow Basics
WDL Variables
Running a WDL from gatk-workflows git repo
Exercise: Samtools Matrix WDL
Intro to Workflow Description Language (WDL)
WDL Linear Task Chaining
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Last Updated: August 12, 2026
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